Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888630.1_cds_XP_016443231.1_38408
CDS Infomation

[gene=LOC107768624] [db_xref=GeneID:107768624] [protein=probable protein phosphatase 2C 75 isoform X1] [protein_id=XP_016443231.1] [location=join(47299..47751,48145..48519,49205..49310,51824..52164)] [gbkey=CDS]
Sequence

ATGCCACTCTGTAACGGCAGTAGCGGTTACACAACTGGGATGCTCAGCAAAGTGAATGGC
AATTCTACCGAGAAATGCAGGAGGCGACGCCGCCGCAGAATTCGAATGAGAAGGCTGCAG
GCCAAGGTTTTATCCTCTGCTACTGCTAATGCTTCCTCGTCATTTTCGCGTAGGACCTTA
TTGTACAACAGCTCAGAAGCTTTGGGCCAAAATAGGGGTGTGGGAGTCAGTTTAGTAGAT
ATGGCTGATCCTTCGTCTGCATCGACGGAGCCTTCTATCGCGGCTAGTCAGACACCAGCC
AGCGGGCCGGTCGTTGGAGTAATTTCTATAATAGGAAGACGGCGTGCAATGGAAGATAAA
TTTTCAATTCGACCTAATCTTTGCTCGCCGGAGATCAATCGCGGCCGACCCGTTGATTTC
TTTGCTATTTACGACGGACATGGTGGACGTCATGTAGCTGCACTGTGTAGCGAAAGGATG
CACGTGCTACTACAAGAAGAGCTGACGCGCGTGGGGGAAAGTACAGACATGAGCGGTAGC
AGCAGTTCTCATGGAAGTGGAACACAACAACAGAGGACAGAGGAAGCCTGGAAAAGAGTG
CTGAGGAGTTGTTTCCTGAGAATTGACGAGATAGCTTCAACCACATGCGGCGAGTGTGGA
AGTGTTGGCCACCAATGCGACTGCGCACGCGACACCTTGGGTCTGACGGGCTCCACCGCC
GTGGTTGCAGTTTTGACGGAAGAAACAATAATTGTAGCCAACTGTGGTGACTCACGCGCC
GTCCTTAGCCGGGACGGAAAGCCCATCCCCCTTTCCTCTGATCATAAGCCGGATAGACGC
GATGAACTAGCCAGAATAGAAGCGTCTGGGGGCCGAGTTGTTTTTGCAAATGGGCCACGG
GTTCAAGGAATTCTTGCCATGTCTAGGGCAATAGGAGACAAGTATCTATCGCCATATGTA
ATATCCGAGCCTGAGATTACCTTCACAAAAAGGGAAGCAGAGGATGAGTGCTTGATTCTT
GCCAGTGATGGTTTGTGGGATGTTATATCAAACGACATGGCGTGTGAGGTGGCTAGTGAG
TGTCTTCGAGAGGAAGATCCAGCTGCGGACCATAGCTTCAGTCCTTTGGTAGAAGGTGAT
AGCGGAGGAAGTGTATATTCTTCCCGAAGTGCATCAGCAGCAGCGCTGCTTACTCGACTT
GCTATGGGACGGAATAGCTGTGATAACATTAGTGTGATTGTGGTTGATCTGAAGAGAAGT
CATACTGGAGGATAG

Peptide Sequence

PEP ID

XP_016443231.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 75 isoform X1 [Nicotiana tabacum]
Sequence

MPLCNGSSGYTTGMLSKVNGNSTEKCRRRRRRRIRMRRLQAKVLSSATANASSSFSRRTL
LYNSSEALGQNRGVGVSLVDMADPSSASTEPSIAASQTPASGPVVGVISIIGRRRAMEDK
FSIRPNLCSPEINRGRPVDFFAIYDGHGGRHVAALCSERMHVLLQEELTRVGESTDMSGS
SSSHGSGTQQQRTEEAWKRVLRSCFLRIDEIASTTCGECGSVGHQCDCARDTLGLTGSTA
VVAVLTEETIIVANCGDSRAVLSRDGKPIPLSSDHKPDRRDELARIEASGGRVVFANGPR
VQGILAMSRAIGDKYLSPYVISEPEITFTKREAEDECLILASDGLWDVISNDMACEVASE
CLREEDPAADHSFSPLVEGDSGGSVYSSRSASAAALLTRLAMGRNSCDNISVIVVDLKRS
HTGG

Transcript Sequence

Gene sequence data has not been registered.